Best Medical Accounting Software of 2024

The most important thing medical accounting software should do is satisfy HIPAA regulations. Beyond that, look for features for managing invoicing, documents and client communications.
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Our pick for simple accounting software
Xero
Our pick for simple accounting software

Xero

Xero

on Xero's website

Product Best for NerdWallet rating Starting at Promotion Learn more
Sage

Sage Intacct

HIPAA-compliant accounting software

N/A

N/A

on Sage's website

Striven

Striven

overall medical accounting software

4.1 /5
$35/month

Per user. Additional pricing tiers per user (per month): $70.

7-day free trial

on Striven's website

Cliniko

Cliniko

Medical practice management software with accounting integration

$45/month

Additional pricing tiers (per month): $95, $145, $195, $295, $395.

30-day free trial

NetSuite

NetSuite

Medical accounting software for large, multi-office practices

N/A

N/A

Product
Product
Best for
Best for
NerdWallet rating
NerdWallet rating
Starting at
Starting at
Promotion
Promotion
Learn more
Learn more
Sage

Sage Intacct

HIPAA-compliant accounting software

N/A

N/A

on Sage's website

Striven

Striven

overall medical accounting software

4.1 /5
$35/month

Per user. Additional pricing tiers per user (per month): $70.

7-day free trial

on Striven's website

Cliniko

Cliniko

Medical practice management software with accounting integration

$45/month

Additional pricing tiers (per month): $95, $145, $195, $295, $395.

30-day free trial

NetSuite

NetSuite

Medical accounting software for large, multi-office practices

N/A

N/A

Sage Intacct

Best for HIPAA-compliant accounting software

Close
Promotion
N/A

on Sage's website

Pros

  • Automation features streamline financial processes.
  • Customizable reports and dashboard enhance business insights.
  • Consolidates many functions, like billing, invoicing, cash flow management payroll and HR, within a single product.

Cons

  • Quote-based pricing makes it difficult to compare with competitors.
  • Not suitable for small businesses that don’t plan to grow.

Striven

Best for overall medical accounting software

Close

4.1

 
Starting at
$35/month

Per user. Additional pricing tiers per user (per month): $70.

Promotion
7-day free trial

on Striven's website

Pros

  • Offers industry-specific features for consulting businesses, nonprofits, manufacturing companies, professional services and more.
  • Other features include inventory tracking, reporting, invoicing, project management tools and the ability to categorize transactions using classes.
  • Tools to ensure tax compliance.
  • Customer support available by phone and live chat.

Cons

  • Monthly costs could add up quickly if you require multiple users.
  • Limited third-party integrations available; no POS or payroll integrations.
  • No mobile app.

Cliniko

Best for Medical practice management software with accounting integration

Close
Cliniko

Starting at
$45/month

Additional pricing tiers (per month): $95, $145, $195, $295, $395.

Promotion
30-day free trial

Pros

  • Industry-specific tools and features.
  • Library of software integrations.
  • HIPAA compliant.
  • 24/7 online support.

Cons

  • Accounting function available through integration only.

NetSuite

Best for Medical accounting software for large, multi-office practices

Close
NetSuite

Promotion
N/A

Pros

  • Can scale to accommodate larger, enterprise businesses.
  • Offers an array of other software products, like CRM, HR, supply chain management, global business management and commerce software for larger companies
  • Industry-specific software solutions for a wide range of businesses, including nonprofits, advertising and digital marketing, consulting, retail and food and beverage.

Cons

  • Pricing is not transparent.
  • Setup fee.
Sort by:

Sage Intacct

Best for HIPAA-compliant accounting software

Promotion
N/A

on Sage's website

Sage Intacct

Best for HIPAA-compliant accounting software

Best for HIPAA-compliant accounting software

Promotion
N/A

on Sage's website

Striven

Best for overall medical accounting software

4.1

 
Starting at
$35/month

Per user. Additional pricing tiers per user (per month): $70.

Promotion
7-day free trial

on Striven's website

Striven

Best for overall medical accounting software

Best for overall medical accounting software

4.1

 
Starting at
$35/month

Per user. Additional pricing tiers per user (per month): $70.

Promotion
7-day free trial

on Striven's website

Cliniko

Cliniko

Best for Medical practice management software with accounting integration

Starting at
$45/month

Additional pricing tiers (per month): $95, $145, $195, $295, $395.

Promotion
30-day free trial

Cliniko

Best for Medical practice management software with accounting integration

Cliniko

Best for Medical practice management software with accounting integration

Starting at
$45/month

Additional pricing tiers (per month): $95, $145, $195, $295, $395.

Promotion
30-day free trial

NetSuite

NetSuite

Best for Medical accounting software for large, multi-office practices

Promotion
N/A

NetSuite

Best for Medical accounting software for large, multi-office practices

NetSuite

Best for Medical accounting software for large, multi-office practices

Promotion
N/A

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How to choose medical accounting software

When it comes to selecting accounting software for your medical practice, your highest priority will be to ensure the product you choose is HIPAA compliant.
Medical practices deal daily with invoices and insurance claims. Trying to keep your patients’ protected health information (PHI) entirely separate from your accounting software could quickly become a daunting — and risky — task. You will find that many HIPAA-compliant accounting software options are embedded within complete practice management software or enterprise resource planning (ERP) software.
In addition to satisfying HIPAA regulations regarding PHI, your medical accounting software should include strong invoicing and billing features, tools for document management and a portal for client communications.

Can you use QuickBooks for medical practice accounting?

You may notice that QuickBooks Online and many of our other highly rated accounting software picks are absent from this list. While those products are strong on accounting functionality and features, they lack HIPAA compliance, which is crucial for medical practices. Our list of recommended medical accounting software includes only HIPAA-compliant options.
Last updated on July 8, 2024

Methodology

NerdWallet independently reviews accounting software products before determining our top picks. We collect the data for our software ratings from products’ public-facing websites and from company representatives. Information is gathered on a regular basis and reviewed by our editorial team for consistency and accuracy.
NerdWallet’s accounting software ratings favor products that are easy to use, reasonably priced, have a robust feature set and can grow with your business. The best accounting software received top marks when evaluated across 10 categories and more than 30 subcategories. Learn more about how we rate small-business accounting software.
These ratings are meant to provide clarity in the decision-making process, but what’s best for your business will depend on its size, growth trajectory and which features you need most. We encourage you to research and compare multiple accounting software products before choosing one.
NerdWallet does not receive compensation for any reviews. Read our editorial guidelines.